Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs10775287 chr16:8710330 G/A 5.74E-5 288 5.72 34.3 25.5 KM Plot
KIRP rs10775288 chr16:8710540 T/C 5.74E-5 288 5.72 34.3 25.5 KM Plot
KIRP rs10775289 chr16:8710592 A/C 5.74E-5 288 5.72 34.3 25.5 KM Plot
KIRP rs10794529 chr1:26683008 A/C 0 281 25.67 25.93 2.52 KM Plot
KIRP rs10849479 chr12:6624806 A/G 2.08E-5 283 23.62 28.03 5.38 KM Plot
KIRP rs10850618 chr12:116789154 G/A 0 284 25.93 25.15 4.07 KM Plot
KIRP rs10852328 chr16:8710497 C/G 5.74E-5 286 5.72 34.3 25.57 KM Plot
KIRP rs10852329 chr16:8710653 G/C 6.19E-5 286 5.72 34.3 25.5 KM Plot
KIRP rs10866625 chr5:156442009 A/G 1.49E-7 286 12.78 24.8 26.2 KM Plot
KIRP rs10882124 chr10:94665826 A/G 7.4E-6 289 26.2 25.23 10.97 KM Plot
KIRP rs10887623 chr10:88315181 A/G 2.51E-7 276 26.4 23.1 9.77 KM Plot
KIRP rs10899863 chr10:44197138 T/C 0.000182 281 25.63 28.03 14.53 KM Plot
KIRP rs10902868 chr10:124815149 C/G 2.48E-7 280 18.33 26.38 25.58 KM Plot
KIRP rs10918104 chr1:161842207 C/T 0.000185 289 25.65 28.58 9.77 KM Plot
KIRP rs10924289 chr1:245821179 A/G 0.000161 280 19.58 30.8 23.5 KM Plot